KIR_Typing_Result

Captures the expert determined allele values for the KIR genes that were typed.

Columns
Name Type Description Foreign Key
result_id int(11) Primary key
allele_1 varchar(250) Name of the KIR allele assayed in standard KIR nomenclature
allele_2 varchar(250) Name of the KIR allele assayed in standard KIR nomenclature
arm_accession varchar(15) Foreign key reference to the ARM_OR_COHORT table arm_or_cohort.arm_accession
biosample_accession varchar(15) Foreign key reference to the BIOSAMPLE table biosample.biosample_accession
comments varchar(500) Free text to expand upon details
experiment_accession varchar(15) Foreign key reference to the EXPERIMENT table experiment.experiment_accession
expsample_accession varchar(15) Foreign key reference to the EXPSAMPLE table expsample.expsample_accession
kir_haplotype varchar(250)
repository_accession varchar(20) Foreign key reference to a public repository
repository_name varchar(50) Name or identifier
study_accession varchar(15) Foreign key reference to the STUDY table study.study_accession
study_time_collected float Reported value
study_time_collected_unit varchar(25) Standardized value in LK_TIME_UNIT table
subject_accession varchar(15) Foreign key reference to the SUBJECT table subject.subject_accession
workspace_id int(11) Foreign key reference to WORKSPACE table workspace.workspace_id
Indexes
Name Column Description
PRIMARY result_id BTREE
idx_kir_arm_accession arm_accession BTREE
idx_kir_biosample_accession biosample_accession BTREE
idx_kir_experiment_accession experiment_accession BTREE
idx_kir_expsample_accession expsample_accession BTREE
idx_kir_subject_accession subject_accession BTREE
idx_kir_study_accession study_accession BTREE
idx_kir_workspace workspace_id BTREE
Tables that Reference this Table
Name Column Table Reference Column Reference
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