immuneexposure

Name immuneExposure.txt
Type single
Schema Version 3.34
Description The subjectHuman and subjectAnimals templates define and annotate the subjects in studies with respect to immune exposure. The Immune Exposure template updates the subjects previously defined in studies with respect to immune exposure.
Template ColumnRequiredDescription
Subject ID True Please enter either a subject user defined ID or ImmPort accession for the subject for the reported immune exposure.
Arm Or Cohort ID True A subject may be assigned to a single arm within a study. When subjects are initially uploaded to ImmPort, they may be assigned to a single study's arm.
Exposure Process Reported True This identifies the type of process through which a host is exposed and the type of evidence for that exposure to have happened, which are tightly intertwined. This is the only element of the four that is always mandatory. Please select an exposure process from the list provided if the process matches yours or enter a exposure process if there is not an appropriate one provided. This exposure process is visible when the result is shared. The value provided by the user is further checked against the pref mapping table lk_exposure_process_pref_map.
Exposure Material Reported False This describes what substance(s) the host is exposed to and/or develops immune reactions to as part of the exposure process. Please select an exposure material from the list provided if the exposure material matches yours or enter a exposure material if there is not an appropriate one provided. This exposure material is visible when the result is shared. The value provided by the user is further checked against the pref mapping table lk_exposure_material_pref_map.
Exposure Material ID False The NCBI or Vaccine Ontology ID associated with the exposure material. If the Exposure Material Reported is not a preferred value, then the Exposure Material ID must be provided. If the Exposure Material Reported is a preferred value, then the Exposure Material ID will be automatically be the ID associated with the preferred value and user will NOT need to supply this ID.
Disease Reported False This indicates the specific disease of the host associated with the exposure. Please select a disease from the list provided if the disease matches yours or enter a disease if there is not an appropriate one provided. This disease is visible when the result is shared. The value provided by the user is further checked against the pref mapping table lk_exposure_material_pref_map.
Disease Ontology ID False The NCBI Disease Ontology ID associated with the disease. If the Disease Reported is not a preferred value, then the Disease Ontology ID must be provided. If the disease is a preferred value, then the Disease Ontology ID will be the DOID associated with the preferred value.
Disease Stage Reported False This provides a broad classification of how the disease has progressed. Please select a disease stage from the list provided if the disease stage matches yours or enter a disease stage if there is not an appropriate one provided. This disease stage is visible when the result is shared.
Back to top